species:   Bodot
pid:       PID1092
parent:    Bd-milR41
paralog:   c
locus:     MU009150.1:1161704-1161803
matures:   ['AGAUAUGUUGUAGAGCGCGG', 'GCGCGUUCGAGCAUAAUUUG']
srr:       SRR8374847
genome:    /Users/jax/+Genomes/Fungal_genomes/Bodot.GCA_011064635.1_ASM1106463v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374847.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Hu2019-my.SRR8374847.cram MU009150.1:1161704-1161803

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

        **********************                                        **********************        
CGUCGAGCCGAGAUAUGUUGUAGAGCGCGGUCGGGCGAUGAGAAUUUUCGCGUACGACAUACCCGUCCGAUCGCGCGUUCGAGCAUAAUUUGGCAGUUAG
......((((((.((((((..((.((((((((((((((((.((....)).)))..........))))))))))))).))..)))))).))))))......
----------AGAUAUGUUGUAGAGCGCGG---------------------------------------------------------------------- l=20 a=0 c
------------------------------------------------------------------------GCGCGUUCGAGCAUAAUUUG-------- l=20 a=0 c*
----------AGAUAUGUUGUAGAGCGCGG---------------------------------------------------------------------- l=20 a=0 ma
------------------------------------------------------------------------GCGCGUUCGAGCAUAAUUUG-------- l=20 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011100
fn-001
